Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833031.1_cds_XP_016505079.1_18452
CDS Infomation

[gene=LOC107823010] [db_xref=GeneID:107823010] [protein=LON peptidase N-terminal domain and RING finger protein 1-like isoform X2] [protein_id=XP_016505079.1] [location=join(14750..14830,14950..15051,16494..16576,16745..16829,16919..17005,17375..17436,17566..17747,17862..17922,18273..18450,18939..18977,19070..19131,19471..19507,20053..20102,20675..20744,21207..21279,21756..21832,21917..21985,23468..23527)] [gbkey=CDS]
Sequence

ATGTCCGGCGACGCTTCTGCTTCTGTTTCTTCTTCTGGGTTTTGTTTAGAGGGGCTTGAT
GATGTTCAAGATTATCCATGGGCGAATGAAGGAGAGCCATCTATGTCGTGGGACAGGTAT
AGTCAACTATACGATGTTGTAAAAACGGGCAACGAAGCATATCGTGAGAATAGATGGGAC
GAGGCTATCAATTCTTACACAAGAGCTAACAACACTAGGCCAAATGATCCTATCATTCTT
AGCAACAGATGCGCTTCATACCTCAGGTTTAGCCAATTTCTGAAAAGTAGAACTGCATCA
GATTCAGAATACAGGCCATTGAGTGGGTTGGATCCTACAACGCTTGCTGGGCTTGCGTTA
AAGGATGCTGAGAAGGTGATGCATCTGCAGAACAATTCAGTAAACTCATATATTCTGAAG
GCAAACTCACTCATTTTGTTAGAAAAAAATGAGCTAGCCCAAGATGTAATCCGTTCAGGC
CTTCAGGTGAATCCCCTAAGCAATCCCCTTCTAAATTTGGAGAAATCGATCACAGCTACA
CTTGGAATGAGAAGCCATGGGAGACCAGAACGCAGTGATGATTTTGACTGTACCCTGTGC
TTAAAGCTATTATATGAACCTATAACAACTCCTTGTGGACATTCTTTTTGCCGTGCATGC
CTCTTCCAATCAATGGACCGATATAACAGATGCCCATTGTGCCGAACAGTTCTTTTCATT
AGTCCCAGAACATGTGCAATCAGTGTAACATTGAATAACATAATAGAAAAGAATTTTCCT
GAGGAATATGCTGAAAGGAAGGCTGAGAATGACAGTCTGATAAACCTTGGTGTTGACTTG
CTGCCTCTTTTTGTCATGGACGTTATTCTACCATGCGAGAAGCTTGCACTTAACATTTTT
GAACCTCGTTACAGACTTATGGTTAGGAGGATAATGGAAGGAAATCGTCGAATGGGAATG
GCTGTTGTTGATCCTACGACTGGTTCGATAGCTGATTGTGCTTGTGAAGTGGAGATTATA
GAATGTGAGCCACTTCCAGACGGGCGTTTCTATCTGGAGGTTGAAAGTCGACGTAGATGC
CGCATTGTACGATATTGGGATCAAGACGGGTATCGTGTTGCTGAGGTTGAATGGATACAT
GATATATGCCCAGCCGAAGGAACAAGAGAGAGGCATGAATTACTGGAGATGGCAAATAAG
GCGGCAGCATTTGCTCAACGGTGGTTGAGGAACGCACAAGAAGTAGCAGGAGATCGTAGA
CGTGCAGAACTCTTCAAAGCGGAAGGATTGATGCCATCACCACAGGATCCTGAGCGCTTA
AGTTTTTGGCTTACAACTTTGACCAGTCATAGACCAACAGAGAAATTAGACCTGCTTCAG
ATAAGAGATACACATGAGAGGATAAGGCGAGGACTCCTATACATGAAAGCAGAAGAACAA
GGATGCAGACTGCAATAA

Peptide Sequence

PEP ID

XP_016505079.1
PEP Infomation

PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like isoform X2 [Nicotiana tabacum]
Sequence

MSGDASASVSSSGFCLEGLDDVQDYPWANEGEPSMSWDRYSQLYDVVKTGNEAYRENRWD
EAINSYTRANNTRPNDPIILSNRCASYLRFSQFLKSRTASDSEYRPLSGLDPTTLAGLAL
KDAEKVMHLQNNSVNSYILKANSLILLEKNELAQDVIRSGLQVNPLSNPLLNLEKSITAT
LGMRSHGRPERSDDFDCTLCLKLLYEPITTPCGHSFCRACLFQSMDRYNRCPLCRTVLFI
SPRTCAISVTLNNIIEKNFPEEYAERKAENDSLINLGVDLLPLFVMDVILPCEKLALNIF
EPRYRLMVRRIMEGNRRMGMAVVDPTTGSIADCACEVEIIECEPLPDGRFYLEVESRRRC
RIVRYWDQDGYRVAEVEWIHDICPAEGTRERHELLEMANKAAAFAQRWLRNAQEVAGDRR
RAELFKAEGLMPSPQDPERLSFWLTTLTSHRPTEKLDLLQIRDTHERIRRGLLYMKAEEQ
GCRLQ

Transcript Sequence

Gene sequence data has not been registered.